by Amit | Apr 11, 2019 | Announcements
We’ve heard the war stories from our fellow bioinformaticians and lab directors: waking up bleary-eyed in the middle of the night to check on the results of an NGS data analysis pipeline, converting files to different formats, setting up the next step of their...
by Amit | Mar 26, 2019 | Announcements
Writers write, painters paint, genomics researchers… wait patiently for algorithm pipelines to finish processing NGS data, only to spend as much time visualizing results? As long-time researchers and bioinformaticians, we’re well aware that in NGS data analysis, every...
by Amit | Mar 22, 2019 | Bioinformatics
NGS Data Analysis Bottlenecks One of the biggest bottlenecks in next generation sequencing (NGS) today is data analysis, which is surprising considering that we have massive compute available at our fingertips, the available infrastructure to process thousands of...
by Amit | Mar 22, 2019 | Announcements
Basepair will be at this year’s Bio-IT World Meet Basepair in Boston, MA from April 16-18, and connect with us to learn how you can run NGS analysis at scale. Our platform is trusted by top institutions such as Partners Healthcare, Harvard Medical School, NYU,...
by Amit | Oct 30, 2016 | Views
Among the factors responsible for scaring people away from bioinformatics, the various input and output filetypes surely rank very high. If you want to plot heat maps using ngsplot, you need a bam file. If you want to use deeptools instead, also to make heat maps, you...
