How automated workflows simplify NGS analysis

NGS Data Analysis Bottlenecks One of the biggest bottlenecks in next generation sequencing (NGS) today is data analysis, which is surprising, considering that we have massive compute available at our fingertips, the available infrastructure to process thousands of...

Visualizing your NGS results with Basepair

Writers write, painters paint, genomics researchers… wait patiently for bioinformatics pipelines to finish processing NGS data, only to spend as much time visualizing results? As long-time researchers and bioinformaticians, we’re well aware that in NGS data analysis,...

Bed Bam & Beyond

Among the factors responsible for scaring people away from bioinformatics, the various input and output filetypes surely rank very high. If you want to plot heat maps using ngsplot, you need a bam file. If you want to use deeptools instead, also to make heat maps, you...