Bioinformatics on AWS, made even
Easier Faster More Cost Predictable
Basepair is the first and only Software-as-a-Service (SaaS) platform that provisions in your own AWS account to deliver out-of-the-box direct integration with AWS HeathOmics, putting you in control of your IT governance, compliance and usage commitments on AWS.
Deploy and Run new Bio Foundational Models Such as AlphaFold in Minutes!
As more healthcare and life science information moves to the cloud, a growing need is to create an environment where research scientists can execute their workflows and interactively visualize their data.
Basepair helps bring a simplified GUI-driven experience to make it easier for scientists to execute their research.
Moreover, this execution is done within a customer’s own AWS account, allowing them to maintain control of their data governance, security, and usage commitments.
Trusted by Industry Leaders at
SOLVING CHALLENGES
Simplyfying Bioinformatics on AWS
Traditional commercial tools fall short by requiring data movement into a hosted solution for either compute, storage or both. It’s time for a new approach to bioinformatics.
Using internal bioinformatics and IT headcount to set up and deploy new Bio Foundational Models such as Alphafold can take time and resources away from focusing on the science.
What if there was a platform that provisioned in your own AWS account, yet delivered the ultra-low operational burden of SaaS to abstract away the heavy lifting of deploying new Bio FMs, so you could focus on accelerating time to scientific insight?
Bioinformatics is often bogged down by routine analysis and interpretation of next generation sequencing (NGS) data creating an unnecessary bottleneck and taking them away from focusing on more valuable activities such as downstream data mining.
What if there was a way to easily deploy ready to run AWS HealthOmics or custom workflows via a point & click graphical user interface so that more scientists could analyze and interactively explore NGS data before collaborating with bioinformatics on an informed question?
Developing complete software applications in house requires a dedicated team of specialist individuals and takes months if not years to get to market.
What if you could partner to rapidly deploy your own branded software application to your customers without having to hire or repurpose resources, all whilst retaining the ability to bundle analysis at the point of sale of your core product or service?
Democratize Omics Data Analysis with Basepair on AWS HealthOmics
BENEFITS
Easier
Point & Click Graphical User Interface
Faster
Built in enterprise platform capabilities such as Login/Access Controls, Import/Export of data, Performance & Certifications / Compliance
Cost Predictable
Basepair with AWS HealthOmics can be up to 30-40% cheaper than S3 intelligent tiering, yet retains the ability to provision in your own AWS account so you are in control of your cloud usage commitment
Visual
Out of the box interactive visualization for rapidly understanding the meaning and value of your data.
Bioinformatics on AWS
Leverage the storage and compute resources in your own AWS account
Amount of time needed to learn the platform
< 10 minutes
Accelerate time to production by
up to 8X
Reduce compute & storage costs by up to
50%
Time saved in routine analysis of raw data
25%
Reduce Data compliance and IT Governance overhead by up to
95%
WORKFLOWS AND TOOLS CURRENTLY DEPLOYED
AWS Ready To Run Workflows
- GATK-BP Germline fq2vcf for 30x genome
- NVIDIA Parabricks Germline HaplotypeCaller WGS for up to 5X
- AlphaFold for 601-1200 residues
- ScRNAseq with KallistoBUStools
- NVIDIA Parabricks FQ2BAM WGS for up to 30X
- AlphaFold for up to 600 residues
- Bases2Fasta for 2×75
- GATK-BP fa2bam
- NVIDIA Parabricks Germline HaplotypeCaller WGS for up to 30X
- NVIDIA Parabricks FQ2BAM WGS for up to 5X
- Bases2Fasta for 2×150
- NVIDIA Parabricks Germline DeepVariant WGS for up to
- ESMFold for up to 800 residues
- Ultima Genomics DeepVariant for up to 40
AWS HealthOmics Sequence Store
- Automated Data Movement Through S3 into and Out of Sequence Store
- Archived Omics ReadSets are automatically activated upon utilization in workflow execution
- Connected Cloud capability enables customers to integrate their own cloud infrastructure for sample storage
Basepair Native Supported Application Areas
- Genomics (WGS, WES, Panels, CRISPR etc)
- Transcriptomics (bulk and single cell RNASeq)
- Epigenetics (ATACSeq, ChIPSeq, CUT&RUN, CUT&TAG etc)
- Metagenomics (16S, Shotgun etc)
“Using Basepair to deploy routine analyses to our bench scientists has freed up about 25% of our time to focus on more valuable data mining tasks. What’s more, bench scientists now come to my team with an informed question rather than a request to work on small, repetitive tasks, improving collaboration between R&D teams.”