Analyze your NGS data in hours
Upload your raw data, choose among several high quality workflows for RNA-Seq, ChIP-Seq, DNA-Seq, etc. and get results in an hour. Start free trialLearn moreTrusted by scientists at
Features at a glance
Web-based
Ready 24/7, signup and use online. No software to install, no hardware to buy.
Easy to Use
Run workflows with a few clicks, less than a minute hands-on time per sample.
Fast
Most workflows finish in an hour, multiple analyses in parallel, no wait time.
Workflows to go
Fully automated workflows for QC, alignment, 2°, 3° analyses and figures.
API
Use REST, Python API or CLI to automate and integrate large projects.
Scalable
Run 1000+ analyses in parallel and practically unlimited storage.
Collaborative
Provide fine-grained access to your data to your collaborators around the world.
Visual reports
Our workflows generate rich reports with visualization of data and results.
Support
Basepair’s scientists are available to help over phone, email or in-person.
Custom workflows
Develop and run custom workflows using any combination of public and private tools.
Consultation
Scientific consultation for complex questions, data integration, figures for publications, etc.
Security
All data is encrypted during rest and transfer and servers behind firewall.