EASY-TO-USE ONLINE NGS ANALYSIS PLATFORM
Analyze your own RNA/DNA/ChIP/ATAC data with BasepairHOW BASEPAIR WORKS
STEP 1
Upload your NGS data to Basepair and select the analyses you want to run from among 30+ automated pipelines.
STEP 2
Basepair starts running your analysis. Thanks to our cloud-based software and AI-powered algorithms, most analyses take 1 hour or less to run. Basepair is fast!
STEP 3
Your analysis is ready! Your results are available online in an interactive report: share your report with colleagues anywhere in the world, use filters and sliders to adjust parameters, download high-res figures, and export files for additional analysis.
Never (again) wait for anyone to analyze your data
Easy to use.
Beautiful to present.
We put you in the driver seat. Basepair provides over 30 automated pipelines and publication-ready reports, so you can focus on making sense of the data.
Trusted by researchers.
Validated by peers.
Rest assured knowing that your NGS analysis is reliable and auditable. Basepair results have been published in dozens of peer-reviewed journals and counting!
Results in an hour.
1000+ parallel workflows.
Basepair is insanely fast! Our cloud-native software scales from one to 1000+ parallel workflows and processes complex analysis in one hour, instead of months.
Scalable NGS Analysis for Enterprise
Pharma
Accelerate the pace of NGS research
Clinical
Enhance your diagnostics with NGS data
Researcher
Straightforward NGS analysis tools
Trusted automated workflows for most common applications
DNA-Seq
QC
Alignment
Process reads
Variant calling
Annotation
RNA-Seq
QC
Alignment
Expression count
Differential expression
ChIP-Seq
QC
Alignment
Peak calling and annotation
Motifs
ATAC-Seq
QC
Alignment
Peak calling and annotation
Open chromatin regions
Learn how automated workflows simplify NGS analysis.
We are constantly evaluating the latest genomics tools to provide the most comprehensive analysis of your data.
Don’t see the analysis you are looking for? Talk to us about developing new custom workflows.
Support for scientists, by scientists
We understand that software is not going to answer all your questions. Basepair’s team of scientists are here to help you with both technical and scientific questions.
Our SLA, so you don't have to wait
We strive to provide a 99.9% availability. Basepair architecture is designed to be robust and fault-tolerant. Our system uptime for the last 12 months is 99.8% and 100% in the last 30 days.
Feedback from our customers
Fast, excellent and reasonably priced...you CAN get all three!! Thank you to the folks at Basepair for helping us deal with some difficult RNA Seq data.
I really like how easy the website is to use. And how quickly the results are generated, including figures. I would have never thought about doing a new analysis like I just did.
Support answers come fast and are always precise!