Clinical Research & Reporting
Game-changing research: from
laboratory to clinic.
NGS data is immensely powerful for advancing personalized medicine, but with each genome, raw data alone is up to 100
gb per sample, multiplied over 1000s of samples!
Having the right tools to analyze and make sense of the data is key to advancing medicine.
Basepair helps physicians and lab directors meet this challenge. Our scalable NGS analysis takes only an hour or less. The customizable reporting tools let you slice and dice the data to quickly identify genomic disease markers and map the course of treatment.
Simplified NGS data analysis and reporting
Higher quality more accessible data leads to deeper insight. Basepair works with physicians to fully automate patient NGS data analysis. Our cloud-native solution scales to handle 1,000+ parallel analysis and integrates directly with internal storage systems and cloud storage (S3, Google Drive, Box, etc.)
Basepair has the proven technology and expertise to successfully help organizations transform NGS-based reporting and advance innovation forward.
With Basepair, you can automatically analyze thousands of samples in hours. The end result? Quick turnaround and timely availability of actionable information.
Analyseand share NGS data in hours not weeks or months
- Trusted by top research universities and publications
- Easy to use, get started in minutes!
- Flexible, scalable and powerful enterprise-class software
- Customized NGS analysis and reporting
- Ready reports and interactive databases for further analysis
Web based, so there is no software to install, manage and upgrade.
- Your samples and results are available online 24-7.
- API-level controls for all tasks, such as to add new samples, run analysis and download results.
Types of Analysis
An overview of Basepair workflows for NGS applications.
See Basepair powered NGS research in peer-reviewed journals.
The bread and butter of our platform
Trusted by top research hospitals worldwide
Read the latest from our blog
Basepair Awarded $300,000 Grant for Development of Software Platform for Pre-Implantation Genetic Testing
The Eunice Kennedy Shriver National Institute of Child Health & Human Development recently awarded Basepair a $300,000 Small Business Innovation Research grant for the development of a software platform for pre-implantation genetic testing of aneuploidy (PGT-A). ...
We are pleased to announce the release of our new pipeline for investigating changes in alternative splicing (AS) in RNA-seq. As a quick reminder, a gene may have many forms (isoforms) depending on which exons and transcription...
Key features We are pleased to announce the release of Basepair's significantly updated single cell RNA-seq (scRNA-seq) pipeline. It brings many improvements in new features, efficiency, and user friendliness: 1. Seurat version 3 Version 3 of the scRNA-seq software we...